Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC116618.1-201ENST00000634617 774 ntBASIC2.46□□□□□ -2.02
RETP07949 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
RETP07949 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RETP07949 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RETP07949 AC087359.1-201ENST00000508335 1740 ntBASIC2.45□□□□□ -2.02
RETP07949 AC012321.1-201ENST00000561622 1588 ntBASIC2.45□□□□□ -2.02
RETP07949 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RETP07949 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RETP07949 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RETP07949 RNU6-28P-201ENST00000362378 107 ntBASIC2.45□□□□□ -2.02
RETP07949 Y_RNA.311-201ENST00000365068 96 ntBASIC2.45□□□□□ -2.02
RETP07949 RPS3AP24-201ENST00000407896 734 ntBASIC2.45□□□□□ -2.02
RETP07949 RNU2-43P-201ENST00000410306 190 ntBASIC2.45□□□□□ -2.02
RETP07949 HIGD1AP15-201ENST00000416198 280 ntBASIC2.45□□□□□ -2.02
RETP07949 RPS24P7-201ENST00000416921 246 ntBASIC2.45□□□□□ -2.02
RETP07949 BEND7P1-201ENST00000422058 457 ntBASIC2.45□□□□□ -2.02
RETP07949 XKRYP1-201ENST00000423438 492 ntBASIC2.45□□□□□ -2.02
RETP07949 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.45□□□□□ -2.02
RETP07949 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 XKRYP2-201ENST00000432915 492 ntBASIC2.45□□□□□ -2.02
RETP07949 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.45□□□□□ -2.02
RETP07949 FGF7P5-201ENST00000441829 291 ntBASIC2.45□□□□□ -2.02
RETP07949 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 HMGN2P23-201ENST00000456759 269 ntBASIC2.45□□□□□ -2.02
RETP07949 RNU7-136P-201ENST00000458819 69 ntBASIC2.45□□□□□ -2.02
RETP07949 MTND1P16-201ENST00000465177 898 ntBASIC2.45□□□□□ -2.02
RETP07949 RNA5SP281-201ENST00000516504 135 ntBASIC2.45□□□□□ -2.02
RETP07949 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 CASP1P1-201ENST00000526345 212 ntBASIC2.45□□□□□ -2.02
RETP07949 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.45□□□□□ -2.02
RETP07949 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RETP07949 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.45□□□□□ -2.02
RETP07949 AL512347.1-201ENST00000566420 503 ntBASIC2.45□□□□□ -2.02
RETP07949 AC025588.2-201ENST00000604851 466 ntBASIC2.45□□□□□ -2.02
RETP07949 AC079597.1-201ENST00000624306 508 ntBASIC2.45□□□□□ -2.02
RETP07949 AC110994.2-201ENST00000635481 492 ntBASIC2.45□□□□□ -2.02
RETP07949 CRYM-AS1-204ENST00000637983 556 ntBASIC2.45□□□□□ -2.02
RETP07949 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RETP07949 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
RETP07949 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RETP07949 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
RETP07949 AP000776.1-201ENST00000530032 1663 ntBASIC2.44□□□□□ -2.02
RETP07949 AC097714.1-201ENST00000511272 1647 ntBASIC2.44□□□□□ -2.02
RETP07949 Y_RNA.4-201ENST00000362333 112 ntBASIC2.44□□□□□ -2.02
RETP07949 RNU6-1159P-201ENST00000362933 107 ntBASIC2.44□□□□□ -2.02
RETP07949 RNU6-76P-201ENST00000384060 104 ntBASIC2.44□□□□□ -2.02
RETP07949 RNU6-83P-201ENST00000384568 112 ntBASIC2.44□□□□□ -2.02
RETP07949 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
RETP07949 RNA5SP354-201ENST00000391247 136 ntBASIC2.44□□□□□ -2.02
RETP07949 BTF3P7-201ENST00000407097 488 ntBASIC2.44□□□□□ -2.02
RETP07949 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
RETP07949 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.44□□□□□ -2.02
RETP07949 TIMM9P2-201ENST00000419324 266 ntBASIC2.44□□□□□ -2.02
RETP07949 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
RETP07949 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.44□□□□□ -2.02
RETP07949 MTCO2P20-201ENST00000437339 673 ntBASIC2.44□□□□□ -2.02
RETP07949 SDCBPP1-201ENST00000440192 890 ntBASIC2.44□□□□□ -2.02
RETP07949 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.44□□□□□ -2.02
RETP07949 RPL26P6-201ENST00000440913 438 ntBASIC2.44□□□□□ -2.02
RETP07949 AL121871.1-201ENST00000443413 436 ntBASIC2.44□□□□□ -2.02
RETP07949 AL591719.1-201ENST00000444669 744 ntBASIC2.44□□□□□ -2.02
RETP07949 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.44□□□□□ -2.02
RETP07949 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
RETP07949 AL135752.1-201ENST00000479477 471 ntBASIC2.44□□□□□ -2.02
RETP07949 RPL9P6-201ENST00000492764 598 ntBASIC2.44□□□□□ -2.02
RETP07949 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.44□□□□□ -2.02
RETP07949 AC034244.1-201ENST00000507687 207 ntBASIC2.44□□□□□ -2.02
RETP07949 HMGB3P3-201ENST00000510526 400 ntBASIC2.44□□□□□ -2.02
RETP07949 AC107222.1-201ENST00000510899 637 ntBASIC2.44□□□□□ -2.02
RETP07949 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.44□□□□□ -2.02
RETP07949 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.44□□□□□ -2.02
RETP07949 RNU6-150P-201ENST00000516237 95 ntBASIC2.44□□□□□ -2.02
RETP07949 RN7SKP287-201ENST00000516546 266 ntBASIC2.44□□□□□ -2.02
RETP07949 HSPE1P18-201ENST00000517602 280 ntBASIC2.44□□□□□ -2.02
RETP07949 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.44□□□□□ -2.02
RETP07949 AC021269.2-201ENST00000532318 330 ntBASIC2.44□□□□□ -2.02
RETP07949 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.44□□□□□ -2.02
RETP07949 MTATP6P24-201ENST00000576835 677 ntBASIC2.44□□□□□ -2.02
RETP07949 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
RETP07949 TPMTP1-201ENST00000592307 737 ntBASIC2.44□□□□□ -2.02
RETP07949 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
RETP07949 AC093424.1-201ENST00000604999 338 ntBASIC2.44□□□□□ -2.02
RETP07949 AP000254.1-201ENST00000609934 520 ntBASIC2.44□□□□□ -2.02
RETP07949 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.44□□□□□ -2.02
RETP07949 AL161629.2-201ENST00000615347 275 ntBASIC2.44□□□□□ -2.02
RETP07949 AC008443.7-201ENST00000622195 246 ntBASIC2.44□□□□□ -2.02
RETP07949 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RETP07949 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RETP07949 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RETP07949 Y_RNA.164-201ENST00000363709 102 ntBASIC2.43□□□□□ -2.02
RETP07949 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
RETP07949 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RETP07949 RPL23AP29-201ENST00000397284 453 ntBASIC2.43□□□□□ -2.02
RETP07949 TPMTP2-201ENST00000414372 726 ntBASIC2.43□□□□□ -2.02
RETP07949 AL008987.1-201ENST00000415528 237 ntBASIC2.43□□□□□ -2.02
RETP07949 MTCO2P21-201ENST00000419780 677 ntBASIC2.43□□□□□ -2.02
RETP07949 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms