Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP001330.5-201ENST00000607176 411 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AC093788.1-201ENST00000609356 927 ntBASIC3.07□□□□□ -1.92
PRKNO60260 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 AC004696.1-201ENST00000614345 607 ntBASIC3.07□□□□□ -1.92
PRKNO60260 SNHG22-203ENST00000617833 660 ntBASIC3.07□□□□□ -1.92
PRKNO60260 RPS4XP5-202ENST00000449995 1334 ntBASIC3.07□□□□□ -1.92
PRKNO60260 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 ZNF680P1-201ENST00000436625 1469 ntBASIC3.07□□□□□ -1.92
PRKNO60260 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 TNPO1P3-201ENST00000436471 2662 ntBASIC3.06□□□□□ -1.92
PRKNO60260 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 RNU6-188P-201ENST00000364207 107 ntBASIC3.06□□□□□ -1.92
PRKNO60260 RNU6-173P-201ENST00000364215 104 ntBASIC3.06□□□□□ -1.92
PRKNO60260 Y_RNA.367-201ENST00000365544 101 ntBASIC3.06□□□□□ -1.92
PRKNO60260 RNU5E-6P-201ENST00000365574 115 ntBASIC3.06□□□□□ -1.92
PRKNO60260 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 RNU6-76P-201ENST00000384060 104 ntBASIC3.06□□□□□ -1.92
PRKNO60260 RNU6-1181P-201ENST00000384191 106 ntBASIC3.06□□□□□ -1.92
PRKNO60260 Y_RNA.481-201ENST00000384373 102 ntBASIC3.06□□□□□ -1.92
PRKNO60260 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PRKNO60260 AC110754.1-201ENST00000399740 601 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
PRKNO60260 TXNP7-201ENST00000406296 293 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 MED13P1-201ENST00000428342 171 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC000111.3-201ENST00000433478 193 ntBASIC3.06□□□□□ -1.92
PRKNO60260 HMGB1P12-201ENST00000438594 598 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 FDX1P2-201ENST00000450769 375 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 TAB3P1-202ENST00000452645 1634 ntBASIC3.06□□□□□ -1.92
PRKNO60260 RPS24P6-201ENST00000452670 400 ntBASIC3.06□□□□□ -1.92
PRKNO60260 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 RNU6-420P-201ENST00000458780 107 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 VN1R104P-201ENST00000505115 1009 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC026427.2-201ENST00000506228 536 ntBASIC3.06□□□□□ -1.92
PRKNO60260 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 RNU6-1281P-201ENST00000516223 105 ntBASIC3.06□□□□□ -1.92
PRKNO60260 SNORA31.22-201ENST00000517204 135 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC107934.2-201ENST00000518653 310 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.06□□□□□ -1.92
PRKNO60260 AC104383.1-201ENST00000530297 370 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC109635.4-202ENST00000531666 412 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.06□□□□□ -1.92
PRKNO60260 AL512310.1-201ENST00000548639 172 ntBASIC3.06□□□□□ -1.92
PRKNO60260 TGIF1P1-201ENST00000558095 802 ntBASIC3.06□□□□□ -1.92
PRKNO60260 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 AC034105.3-201ENST00000565294 442 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 AC015917.1-201ENST00000579654 510 ntBASIC3.06□□□□□ -1.92
PRKNO60260 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.06□□□□□ -1.92
PRKNO60260 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PRKNO60260 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PRKNO60260 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.06□□□□□ -1.92
PRKNO60260 MIR3651-201ENST00000630427 90 ntBASIC3.06□□□□□ -1.92
PRKNO60260 MIR1321-201ENST00000637766 79 ntBASIC3.06□□□□□ -1.92
PRKNO60260 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.06□□□□□ -1.92
PRKNO60260 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PRKNO60260 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRKNO60260 AC009812.4-201ENST00000569134 1805 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC092326.2-201ENST00000624772 1561 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC004520.1-201ENST00000608362 1413 ntBASIC3.05□□□□□ -1.92
PRKNO60260 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RNU6-1284P-201ENST00000363701 100 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RNU6-1322P-201ENST00000364309 107 ntBASIC3.05□□□□□ -1.92
PRKNO60260 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PRKNO60260 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AL591416.1-201ENST00000404015 867 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RPL30P2-201ENST00000414021 291 ntBASIC3.05□□□□□ -1.92
PRKNO60260 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 MRPL50P2-201ENST00000416821 482 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RPL23AP82-202ENST00000427528 469 ntBASIC3.05□□□□□ -1.92
PRKNO60260 MTATP6P4-201ENST00000427725 675 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 ARF4P2-201ENST00000430209 526 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AL606489.2-201ENST00000433886 234 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms