Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM38O00635 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TRIM38O00635 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TRIM38O00635 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM38O00635 Y_RNA.1-201ENST00000352915 104 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 RNY1P12-201ENST00000364251 105 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 RNU6-907P-201ENST00000390924 102 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 SNORA75.4-201ENST00000391278 119 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 RHEBP3-201ENST00000411920 351 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM38O00635 AC018630.2-202ENST00000422992 927 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 NDUFB4P7-201ENST00000423198 363 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 USP9YP36-201ENST00000424581 829 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 ISCA1P6-201ENST00000427740 390 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC091286.1-201ENST00000431233 461 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM38O00635 AC140076.1-201ENST00000449897 361 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 SNRPGP6-201ENST00000451124 220 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM38O00635 MTCO3P20-201ENST00000454926 688 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC233279.1-201ENST00000455300 423 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AL049714.1-201ENST00000466686 347 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 RPL7P49-201ENST00000471402 708 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM38O00635 RNU1-95P-201ENST00000516357 160 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 RNU1-128P-201ENST00000516704 160 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM38O00635 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM38O00635 AC128657.1-201ENST00000549459 145 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 HIF1AP1-201ENST00000553642 175 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC020661.2-201ENST00000560114 134 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AL391646.1-201ENST00000603860 190 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AC124312.5-201ENST00000604451 268 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 AL591424.2-201ENST00000617023 128 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM38O00635 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM38O00635 AL137003.2-201ENST00000606924 2538 ntBASIC3.87□□□□□ -1.79
TRIM38O00635 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM38O00635 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
TRIM38O00635 AC008568.2-201ENST00000623862 2313 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 Y_RNA.72-201ENST00000362894 103 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 RNU6-1085P-201ENST00000363576 107 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 RNA5SP399-201ENST00000364003 117 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 SNORA63C-201ENST00000364578 129 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM38O00635 SNORA20.2-201ENST00000383922 131 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 RNU6-767P-201ENST00000384132 107 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 RNU6-1103P-201ENST00000384150 107 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 MIR606-201ENST00000384851 96 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 MIR7-3-201ENST00000384898 110 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 MIR514A1-201ENST00000385133 98 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM38O00635 RNU6-908P-201ENST00000410160 94 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 RNU6-195P-201ENST00000411352 109 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM38O00635 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM38O00635 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM38O00635 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM38O00635 AC010631.1-201ENST00000474150 156 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM38O00635 AC010486.1-201ENST00000511793 424 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM38O00635 RNU1-61P-201ENST00000516107 151 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC026403.1-201ENST00000518938 295 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM38O00635 AP005597.4-201ENST00000526762 229 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AL512310.1-201ENST00000548639 172 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM38O00635 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM38O00635 AC087499.8-201ENST00000578406 226 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 NRBF2P5-201ENST00000603087 788 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC012468.1-201ENST00000604888 430 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM38O00635 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM38O00635 RMST_3.1-201ENST00000611651 109 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC004696.1-201ENST00000614345 607 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AL110115.1-201ENST00000614396 364 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AL034408.1-202ENST00000636088 415 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 AC009093.8-201ENST00000641769 292 ntBASIC3.86□□□□□ -1.79
TRIM38O00635 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TRIM38O00635 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TRIM38O00635 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM38O00635 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM38O00635 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM38O00635 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM38O00635 Y_RNA.67-201ENST00000362870 100 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 SNORA5A-201ENST00000384111 134 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 MIR1251-201ENST00000408552 70 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 SNORA3.3-201ENST00000408712 125 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 AL590383.1-201ENST00000428602 75 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC133104.1-201ENST00000429100 218 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM38O00635 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM38O00635 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC020550.1-201ENST00000447385 163 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms