Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AL773524.1-201ENST00000614065 229 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGN4O00479 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HMGN4O00479 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
HMGN4O00479 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMGN4O00479 TXNP7-201ENST00000406296 293 ntBASIC1.02□□□□□ -2.25
HMGN4O00479 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 AC099548.1-201ENST00000421443 426 ntBASIC1.02□□□□□ -2.25
HMGN4O00479 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 DNAJC19P4-201ENST00000440115 345 ntBASIC1.02□□□□□ -2.25
HMGN4O00479 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGN4O00479 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGN4O00479 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGN4O00479 SUMO2P6-201ENST00000505273 288 ntBASIC1.02□□□□□ -2.25
HMGN4O00479 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMGN4O00479 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGN4O00479 VN1R80P-201ENST00000597126 338 ntBASIC1.02□□□□□ -2.25
HMGN4O00479 AC005858.4-201ENST00000623191 700 ntBASIC1.02□□□□□ -2.25
HMGN4O00479 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HMGN4O00479 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGN4O00479 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HMGN4O00479 AC111188.2-201ENST00000529697 1387 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 SNORD14B-201ENST00000364533 90 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 RNU6-730P-201ENST00000383954 104 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AL158823.1-201ENST00000418441 478 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AC004865.1-201ENST00000442276 1003 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AC233982.1-201ENST00000451247 436 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AC147055.4-201ENST00000504399 745 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGN4O00479 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AL133241.1-201ENST00000556832 487 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 AC079791.1-201ENST00000605356 973 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGN4O00479 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.01□□□□□ -2.25
HMGN4O00479 AC025048.6-202ENST00000627667 438 ntBASIC1.01□□□□□ -2.25
HMGN4O00479 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1□□□□□ -2.25
HMGN4O00479 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
HMGN4O00479 MFSD8-213ENST00000641134 1327 ntBASIC1□□□□□ -2.25
HMGN4O00479 MIR378A-201ENST00000362177 66 ntBASIC1□□□□□ -2.25
HMGN4O00479 RNU4-51P-201ENST00000364206 140 ntBASIC1□□□□□ -2.25
HMGN4O00479 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1□□□□□ -2.25
HMGN4O00479 MIR513A1-201ENST00000385138 129 ntBASIC1□□□□□ -2.25
HMGN4O00479 CISD1P1-201ENST00000393907 327 ntBASIC1□□□□□ -2.25
HMGN4O00479 VN1R36P-201ENST00000414936 291 ntBASIC1□□□□□ -2.25
HMGN4O00479 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 HMGB1P9-201ENST00000429856 646 ntBASIC1□□□□□ -2.25
HMGN4O00479 MICF-203ENST00000432679 129 ntBASIC1□□□□□ -2.25
HMGN4O00479 MRPL35P4-201ENST00000453682 566 ntBASIC1□□□□□ -2.25
HMGN4O00479 SNORD97-201ENST00000459187 142 ntBASIC1□□□□□ -2.25
HMGN4O00479 AC027575.1-201ENST00000481064 460 ntBASIC1□□□□□ -2.25
HMGN4O00479 AC021146.2-201ENST00000504736 556 ntBASIC1□□□□□ -2.25
HMGN4O00479 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 AC022447.1-201ENST00000515358 464 ntBASIC1□□□□□ -2.25
HMGN4O00479 MIR892C-201ENST00000516410 77 ntBASIC1□□□□□ -2.25
HMGN4O00479 SNORD116-30-201ENST00000516468 85 ntBASIC1□□□□□ -2.25
HMGN4O00479 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1□□□□□ -2.25
HMGN4O00479 CA1-215ENST00000522389 551 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1□□□□□ -2.25
HMGN4O00479 MTCYBP23-201ENST00000558717 1102 ntBASIC1□□□□□ -2.25
HMGN4O00479 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 AC055876.5-201ENST00000605667 259 ntBASIC1□□□□□ -2.25
HMGN4O00479 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
HMGN4O00479 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1□□□□□ -2.25
HMGN4O00479 OR5H6-203ENST00000642105 978 ntBASIC1□□□□□ -2.25
HMGN4O00479 AC025263.3-201ENST00000622965 1396 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 MIR126-201ENST00000362291 85 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.99□□□□□ -2.25
HMGN4O00479 SNORA51.12-201ENST00000384448 134 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC004965.1-201ENST00000413033 213 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGN4O00479 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 AC244636.1-201ENST00000421152 228 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGN4O00479 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 AL049714.1-201ENST00000466686 347 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC104164.3-201ENST00000467363 1258 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC098862.1-201ENST00000504991 413 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 RNU6-1095P-201ENST00000516148 108 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 AC025857.1-201ENST00000525252 377 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 MTCYBP27-201ENST00000555160 670 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 MIR3199-1-201ENST00000582434 88 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms