Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RNU6-140P-201ENST00000384566 108 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 RNU6-1179P-201ENST00000384667 107 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 RNU6-510P-201ENST00000391239 108 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 RNU2-68P-201ENST00000410878 191 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 CYCSP19-201ENST00000411715 316 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 NDUFB4P5-201ENST00000415445 361 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 RPL23AP69-201ENST00000431134 458 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AL360271.2-201ENST00000447710 161 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC034236.1-201ENST00000469891 373 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 FAM206BP-201ENST00000510179 541 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 RNU4-49P-201ENST00000516080 140 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC005668.1-201ENST00000571142 476 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC136601.2-201ENST00000604356 474 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AC064801.1-201ENST00000612025 407 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 uc_338.32-201ENST00000615087 172 ntBASIC3.59□□□□□ -1.83
MBD3L3A6NE82 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L3A6NE82 AL161912.2-201ENST00000565707 3007 ntBASIC3.59□□□□□ -1.84
MBD3L3A6NE82 AC016588.2-201ENST00000632484 3021 ntBASIC3.59□□□□□ -1.84
MBD3L3A6NE82 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.59□□□□□ -1.84
MBD3L3A6NE82 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.84
MBD3L3A6NE82 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 RNU6-1252P-201ENST00000363054 104 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 RNU6-371P-201ENST00000364283 108 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 Y_RNA.399-201ENST00000383955 105 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 RN7SKP53-201ENST00000411337 315 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 USP9YP20-201ENST00000419224 558 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 RPL21P109-201ENST00000422213 475 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AL353678.1-201ENST00000422735 741 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AL365400.1-201ENST00000431854 640 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 SNRPEP9-201ENST00000436794 238 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 IFNA20P-201ENST00000436840 528 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC093019.1-201ENST00000443135 252 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AP002812.1-201ENST00000495378 474 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 SNORA19.2-201ENST00000516013 114 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 RNU6-1282P-201ENST00000516735 96 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC090115.3-201ENST00000553218 849 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC091135.1-201ENST00000585943 307 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC005498.1-201ENST00000592125 465 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC073539.2-201ENST00000597113 165 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC103705.1-201ENST00000619013 241 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 AC099654.5-201ENST00000636479 350 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 Z82217.1-201ENST00000625157 8149 ntBASIC3.58□□□□□ -1.84
MBD3L3A6NE82 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.58□□□□□ -1.84
MBD3L3A6NE82 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.57□□□□□ -1.84
MBD3L3A6NE82 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L3A6NE82 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L3A6NE82 FTLP6-201ENST00000355274 422 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L3A6NE82 SNORD35B-201ENST00000363660 87 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 Y_RNA.167-201ENST00000363735 109 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 U3.12-201ENST00000364498 214 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 RNU6-1303P-201ENST00000364841 107 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
MBD3L3A6NE82 Y_RNA.414-201ENST00000384011 101 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 EIF4E2P1-201ENST00000393781 255 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 RPS4XP3-201ENST00000398541 413 ntBASIC3.57□□□□□ -1.84
MBD3L3A6NE82 HDGFP1-201ENST00000405943 252 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms