Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
PdfS4R2K0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PdfS4R2K0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PdfS4R2K0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.49□□□□□ -0.41
PdfS4R2K0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.48□□□□□ -0.41
PdfS4R2K0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Gm10138-203ENSMUST00000206952 366 ntBASIC12.48□□□□□ -0.41
PdfS4R2K0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
PdfS4R2K0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdfS4R2K0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.47□□□□□ -0.41
PdfS4R2K0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.47□□□□□ -0.41
PdfS4R2K0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Gm6576-201ENSMUST00000169678 883 ntBASIC12.47□□□□□ -0.41
PdfS4R2K0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.47□□□□□ -0.41
PdfS4R2K0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.47□□□□□ -0.41
PdfS4R2K0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PdfS4R2K0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PdfS4R2K0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdfS4R2K0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
PdfS4R2K0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.46□□□□□ -0.41
PdfS4R2K0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.46□□□□□ -0.41
PdfS4R2K0 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.46□□□□□ -0.41
PdfS4R2K0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdfS4R2K0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms