Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb2S4R1M3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
H2afb2S4R1M3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb2S4R1M3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gm9013-201ENSMUST00000132939 882 ntBASIC16.24■□□□□ 0.19
H2afb2S4R1M3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms