Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gm11539-201ENSMUST00000119837 557 ntBASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gm13474-201ENSMUST00000122466 815 ntBASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gm18115-201ENSMUST00000221209 621 ntBASIC14.62□□□□□ -0.07
H2afb3S4R1G7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb3S4R1G7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Gm2274-201ENSMUST00000184539 609 ntBASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Gm5417-201ENSMUST00000079706 384 ntBASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb3S4R1G7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Phf7-203ENSMUST00000226565 1971 ntBASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb3S4R1G7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms