Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm3375-201ENSMUST00000203929 796 ntBASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Gm10812-201ENSMUST00000099864 546 ntBASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1S4R1E0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1S4R1E0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
H2afb1S4R1E0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.73□□□□□ -0.05
H2afb1S4R1E0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms