Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Gm18733-201ENSMUST00000173950 856 ntBASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Gm43347-201ENSMUST00000200226 580 ntBASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Gm5864-201ENSMUST00000202263 970 ntBASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.24■□□□□ 0.19
Shroom3Q9QXN0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom3Q9QXN0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom3Q9QXN0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Shroom3Q9QXN0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms