Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Gm43553-201ENSMUST00000200900 685 ntBASIC16.64■□□□□ 0.25
Msh5Q9QUM7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh5Q9QUM7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Msh5Q9QUM7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh5Q9QUM7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Gm7370-201ENSMUST00000219471 767 ntBASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms