Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Gm26039-201ENSMUST00000158152 144 ntBASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtn3Q9ES97 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Actl10-202ENSMUST00000226583 1501 ntBASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn3Q9ES97 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn3Q9ES97 Phf7-203ENSMUST00000226565 1971 ntBASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn3Q9ES97 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn3Q9ES97 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms