Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Gm37153-201ENSMUST00000193637 231 ntBASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-4Q9EQM3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-4Q9EQM3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Gm17968-201ENSMUST00000194902 784 ntBASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-4Q9EQM3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nkx2-4Q9EQM3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Nkx2-4Q9EQM3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx2-4Q9EQM3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms