Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Gm6345-202ENSMUST00000180900 204 ntBASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Gm10566-201ENSMUST00000086739 996 ntBASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a3bpQ9EQG9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a3bpQ9EQG9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col4a3bpQ9EQG9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Gm11336-201ENSMUST00000118168 334 ntBASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Gm36967-201ENSMUST00000193814 266 ntBASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a3bpQ9EQG9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms