Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Gm12933-201ENSMUST00000120203 872 ntBASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Gm17661-201ENSMUST00000170317 270 ntBASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hmgn3Q9DCB1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Gm37179-201ENSMUST00000194862 823 ntBASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.29■□□□□ 0.04
Hmgn3Q9DCB1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Gm15375-201ENSMUST00000119510 849 ntBASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn3Q9DCB1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms