Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Gm18195-201ENSMUST00000207604 706 ntBASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Rps4l-201ENSMUST00000071745 943 ntBASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rsph3bQ9DA80 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rsph3bQ9DA80 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rsph3bQ9DA80 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rsph3bQ9DA80 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Gm6376-201ENSMUST00000209407 580 ntBASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.74■□□□□ 0.43
Rsph3bQ9DA80 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Gm18733-201ENSMUST00000173950 856 ntBASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Gm25745-201ENSMUST00000174945 133 ntBASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rsph3bQ9DA80 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms