Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Gm5921-201ENSMUST00000075898 882 ntBASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd3l1Q9D9H3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mbd3l1Q9D9H3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Mbd3l1Q9D9H3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mbd3l1Q9D9H3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mbd3l1Q9D9H3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mbd3l1Q9D9H3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Gm13401-201ENSMUST00000117074 291 ntBASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mbd3l1Q9D9H3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Mbd3l1Q9D9H3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd3l1Q9D9H3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd3l1Q9D9H3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd3l1Q9D9H3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms