Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Gm9987-201ENSMUST00000069768 567 ntBASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gtf3c6Q9D8P7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Gm10231-201ENSMUST00000181584 441 ntBASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Gm10175-202ENSMUST00000208752 441 ntBASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Gm43868-201ENSMUST00000205187 2114 ntBASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gtf3c6Q9D8P7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gtf3c6Q9D8P7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gtf3c6Q9D8P7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gtf3c6Q9D8P7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gtf3c6Q9D8P7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gtf3c6Q9D8P7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gtf3c6Q9D8P7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gtf3c6Q9D8P7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gtf3c6Q9D8P7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms