Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clca1Q9D7Z6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Actl10-202ENSMUST00000226583 1501 ntBASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Gm9013-201ENSMUST00000132939 882 ntBASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clca1Q9D7Z6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Clca1Q9D7Z6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clca1Q9D7Z6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Gm11355-201ENSMUST00000121120 306 ntBASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Gm10819-201ENSMUST00000099988 561 ntBASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clca1Q9D7Z6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clca1Q9D7Z6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms