Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Snrnp48Q9D361 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Gm6345-202ENSMUST00000180900 204 ntBASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Snrnp48Q9D361 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Gm29518-201ENSMUST00000190858 372 ntBASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Gm17808-201ENSMUST00000200859 894 ntBASIC16.21■□□□□ 0.19
Snrnp48Q9D361 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp48Q9D361 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snrnp48Q9D361 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp48Q9D361 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp48Q9D361 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms