Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Mir5122-201ENSMUST00000175004 89 ntBASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Gm27463-201ENSMUST00000183569 57 ntBASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Ssr1Q9CY50 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssr1Q9CY50 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.6■□□□□ 0.41
Ssr1Q9CY50 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Gm5417-201ENSMUST00000079706 384 ntBASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Ssr1Q9CY50 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.59■□□□□ 0.41
Ssr1Q9CY50 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms