Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Atxn3Q9CVD2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Atxn3Q9CVD2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn3Q9CVD2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn3Q9CVD2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn3Q9CVD2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn3Q9CVD2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Gm12895-201ENSMUST00000122214 226 ntBASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn3Q9CVD2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms