Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Rnf111Q99ML9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf111Q99ML9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Gm16061-201ENSMUST00000122167 857 ntBASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.76■□□□□ 0.11
Rnf111Q99ML9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf111Q99ML9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf111Q99ML9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Gm13474-201ENSMUST00000122466 815 ntBASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms