Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Gm17808-201ENSMUST00000200859 894 ntBASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr3Q99MB1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr3Q99MB1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Gm7461-201ENSMUST00000058918 827 ntBASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tlr3Q99MB1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms