Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Mir8117-201ENSMUST00000184773 107 ntBASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Gm9172-201ENSMUST00000212092 954 ntBASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Chchd1-203ENSMUST00000224633 557 ntBASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx6-1Q99MA9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Gm14701-201ENSMUST00000117156 348 ntBASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx6-1Q99MA9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx6-1Q99MA9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms