Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Gm5417-201ENSMUST00000079706 384 ntBASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap3Q99LM2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap3Q99LM2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gm16061-201ENSMUST00000122167 857 ntBASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gm2274-201ENSMUST00000184539 609 ntBASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap3Q99LM2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms