Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd1Q99J36 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd1Q99J36 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Thumpd1Q99J36 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms