Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Gm8097-201ENSMUST00000117903 829 ntBASIC19.13■□□□□ 0.65
Col20a1Q923P0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.13■□□□□ 0.65
Col20a1Q923P0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.13■□□□□ 0.65
Col20a1Q923P0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.13■□□□□ 0.65
Col20a1Q923P0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col20a1Q923P0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.12■□□□□ 0.65
Col20a1Q923P0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.12■□□□□ 0.65
Col20a1Q923P0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Gm13418-201ENSMUST00000119097 944 ntBASIC19.12■□□□□ 0.65
Col20a1Q923P0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Gm8655-201ENSMUST00000221159 852 ntBASIC19.12■□□□□ 0.65
Col20a1Q923P0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col20a1Q923P0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Mir5131-201ENSMUST00000175426 93 ntBASIC19.11■□□□□ 0.65
Col20a1Q923P0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.11■□□□□ 0.65
Col20a1Q923P0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col20a1Q923P0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.1■□□□□ 0.65
Col20a1Q923P0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.1■□□□□ 0.65
Col20a1Q923P0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.1■□□□□ 0.65
Col20a1Q923P0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.1■□□□□ 0.65
Col20a1Q923P0 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.1■□□□□ 0.65
Col20a1Q923P0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col20a1Q923P0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Gm7230-201ENSMUST00000173026 815 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms