Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb6Q91XZ4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb6Q91XZ4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pcdhb6Q91XZ4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Gm25016-201ENSMUST00000158399 131 ntBASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb6Q91XZ4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb6Q91XZ4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Gm11950-201ENSMUST00000121615 838 ntBASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Gm29518-201ENSMUST00000190858 372 ntBASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb6Q91XZ4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 209 ms