Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Actl10-202ENSMUST00000226583 1501 ntBASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga3Q91XY5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga3Q91XY5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Gm18115-201ENSMUST00000221209 621 ntBASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga3Q91XY5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdhga3Q91XY5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga3Q91XY5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdhga3Q91XY5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhga3Q91XY5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms