Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Gm33142-201ENSMUST00000193913 867 ntBASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb21Q91V48 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb21Q91V48 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Gm14859-201ENSMUST00000117752 357 ntBASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Gm10052-201ENSMUST00000168019 960 ntBASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Gm7729-201ENSMUST00000050143 801 ntBASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb21Q91V48 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb21Q91V48 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb21Q91V48 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb21Q91V48 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb21Q91V48 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Gm13216-201ENSMUST00000117145 591 ntBASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb21Q91V48 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb21Q91V48 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms