Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tram1Q91V04 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tram1Q91V04 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tram1Q91V04 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.03□□□□□ -0.16
Tram1Q91V04 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tram1Q91V04 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tram1Q91V04 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tram1Q91V04 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tram1Q91V04 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.02□□□□□ -0.16
Tram1Q91V04 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Tram1Q91V04 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.02□□□□□ -0.16
Tram1Q91V04 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.02□□□□□ -0.16
Tram1Q91V04 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tram1Q91V04 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tram1Q91V04 Gm12382-201ENSMUST00000122005 922 ntBASIC14.02□□□□□ -0.17
Tram1Q91V04 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.02□□□□□ -0.17
Tram1Q91V04 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tram1Q91V04 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tram1Q91V04 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.02□□□□□ -0.17
Tram1Q91V04 Gm10517-202ENSMUST00000192970 758 ntBASIC14.02□□□□□ -0.17
Tram1Q91V04 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tram1Q91V04 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tram1Q91V04 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tram1Q91V04 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.02□□□□□ -0.17
Tram1Q91V04 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tram1Q91V04 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Tram1Q91V04 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tram1Q91V04 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tram1Q91V04 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Dio3-201ENSMUST00000097228 1449 ntBASIC14.01□□□□□ -0.17
Tram1Q91V04 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.01□□□□□ -0.17
Tram1Q91V04 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.01□□□□□ -0.17
Tram1Q91V04 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tram1Q91V04 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.01□□□□□ -0.17
Tram1Q91V04 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tram1Q91V04 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tram1Q91V04 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Gm38042-201ENSMUST00000191614 5208 ntBASIC14□□□□□ -0.17
Tram1Q91V04 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14□□□□□ -0.17
Tram1Q91V04 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Gm13148-201ENSMUST00000118892 745 ntBASIC14□□□□□ -0.17
Tram1Q91V04 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Mir5133-201ENSMUST00000174955 77 ntBASIC14□□□□□ -0.17
Tram1Q91V04 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14□□□□□ -0.17
Tram1Q91V04 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tram1Q91V04 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tram1Q91V04 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tram1Q91V04 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tram1Q91V04 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tram1Q91V04 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms