Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Gm14859-201ENSMUST00000117752 357 ntBASIC14.58□□□□□ -0.08
Odf4Q8VI88 Gm33142-201ENSMUST00000193913 867 ntBASIC14.58□□□□□ -0.08
Odf4Q8VI88 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Odf4Q8VI88 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Gm37025-201ENSMUST00000195159 829 ntBASIC14.57□□□□□ -0.08
Odf4Q8VI88 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Odf4Q8VI88 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Odf4Q8VI88 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.56□□□□□ -0.08
Odf4Q8VI88 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Gm27389-201ENSMUST00000183622 195 ntBASIC14.56□□□□□ -0.08
Odf4Q8VI88 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Odf4Q8VI88 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Gm25016-201ENSMUST00000158399 131 ntBASIC14.55□□□□□ -0.08
Odf4Q8VI88 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Gm9731-201ENSMUST00000209480 747 ntBASIC14.55□□□□□ -0.08
Odf4Q8VI88 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Odf4Q8VI88 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Odf4Q8VI88 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 6.7 ms