Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Gm12896-201ENSMUST00000118430 226 ntBASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Gm9731-201ENSMUST00000209480 747 ntBASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab40cQ8VHQ4 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Gm12441-201ENSMUST00000121806 588 ntBASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rab40cQ8VHQ4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rab40cQ8VHQ4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rab40cQ8VHQ4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms