Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Rpap2Q8VC34 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpap2Q8VC34 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rpap2Q8VC34 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Gm27742-201ENSMUST00000184667 60 ntBASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Gm27704-201ENSMUST00000185094 107 ntBASIC17.81■□□□□ 0.44
Rpap2Q8VC34 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpap2Q8VC34 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Gm33142-201ENSMUST00000193913 867 ntBASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpap2Q8VC34 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms