Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc9Q8VC31 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc9Q8VC31 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Gm13534-201ENSMUST00000121169 513 ntBASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc9Q8VC31 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc9Q8VC31 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc9Q8VC31 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms