Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Gm25016-201ENSMUST00000158399 131 ntBASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.4■□□□□ 0.06
Ubqln1Q8R317 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubqln1Q8R317 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.39■□□□□ 0.05
Ubqln1Q8R317 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubqln1Q8R317 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gm6659-201ENSMUST00000174752 547 ntBASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubqln1Q8R317 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Dancr-204ENSMUST00000132389 2347 ntBASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ubqln1Q8R317 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms