Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gtf3c5Q8R2T8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Gm17808-201ENSMUST00000200859 894 ntBASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Gtf3c5Q8R2T8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c5Q8R2T8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gtf3c5Q8R2T8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Gm5422-201ENSMUST00000050717 2721 ntBASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c5Q8R2T8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Gm43321-201ENSMUST00000198897 2409 ntBASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.03■□□□□ 0.64
Gtf3c5Q8R2T8 Gm44430-201ENSMUST00000203376 995 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms