Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Gm18206-201ENSMUST00000207027 926 ntBASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc9Q8R1J3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Gm27867-201ENSMUST00000184778 125 ntBASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc9Q8R1J3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Gm2651-201ENSMUST00000203560 838 ntBASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc9Q8R1J3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms