Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp40Q8R1F9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Gm24589-201ENSMUST00000116692 94 ntBASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp40Q8R1F9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp40Q8R1F9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Gm7153-201ENSMUST00000117092 455 ntBASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms