Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a1Q8K4Z5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a1Q8K4Z5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a1Q8K4Z5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Sf3a1Q8K4Z5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a1Q8K4Z5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Sf3a1Q8K4Z5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms