Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Gm18489-201ENSMUST00000172565 551 ntBASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col23a1Q8K4G2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.64■□□□□ 0.74
Col23a1Q8K4G2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col23a1Q8K4G2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Col23a1Q8K4G2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col23a1Q8K4G2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Col23a1Q8K4G2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Rprl2-201ENSMUST00000157150 290 ntBASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Gm43767-201ENSMUST00000198933 381 ntBASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col23a1Q8K4G2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Gm27437-201ENSMUST00000183429 107 ntBASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col23a1Q8K4G2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col23a1Q8K4G2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col23a1Q8K4G2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col23a1Q8K4G2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms