Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 AA414768-201ENSMUST00000121924 1257 ntBASIC15.35■□□□□ 0.05
Clrn1Q8K445 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Gm25016-201ENSMUST00000158399 131 ntBASIC15.35■□□□□ 0.05
Clrn1Q8K445 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.34■□□□□ 0.05
Clrn1Q8K445 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.34■□□□□ 0.05
Clrn1Q8K445 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clrn1Q8K445 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Clrn1Q8K445 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clrn1Q8K445 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clrn1Q8K445 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.33■□□□□ 0.04
Clrn1Q8K445 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clrn1Q8K445 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clrn1Q8K445 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms