Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Gm29518-201ENSMUST00000190858 372 ntBASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rfwd3Q8CIK8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Gm6623-201ENSMUST00000173570 544 ntBASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd3Q8CIK8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Gm11950-201ENSMUST00000121615 838 ntBASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Gm17808-201ENSMUST00000200859 894 ntBASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rfwd3Q8CIK8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.27■□□□□ 0.03
Rfwd3Q8CIK8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms