Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1aQ8CIG0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1aQ8CIG0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Gm25990-201ENSMUST00000102440 86 ntBASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1aQ8CIG0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Gm8655-201ENSMUST00000221159 852 ntBASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Depdc1aQ8CIG0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm11780-201ENSMUST00000136880 516 ntBASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm18733-201ENSMUST00000173950 856 ntBASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm10060-201ENSMUST00000212002 111 ntBASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms