Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb7Q8CDY9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb7Q8CDY9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb7Q8CDY9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.33■□□□□ 0.21
Pcdhb7Q8CDY9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb7Q8CDY9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb7Q8CDY9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb7Q8CDY9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb7Q8CDY9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb7Q8CDY9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms