Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.88■□□□□ 0.61
Vps53Q8CCB4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.87■□□□□ 0.61
Vps53Q8CCB4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Mzt1-203ENSMUST00000227948 952 ntBASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps53Q8CCB4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps53Q8CCB4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps53Q8CCB4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms