Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Gm12527-201ENSMUST00000117967 564 ntBASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Gm10698-201ENSMUST00000182663 604 ntBASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Lysmd4Q8CC84 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lysmd4Q8CC84 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lysmd4Q8CC84 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lysmd4Q8CC84 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lysmd4Q8CC84 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lysmd4Q8CC84 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Lysmd4Q8CC84 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Gm5643-201ENSMUST00000117081 966 ntBASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lysmd4Q8CC84 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lysmd4Q8CC84 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Gm36967-201ENSMUST00000193814 266 ntBASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms