Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.84■□□□□ 0.61
Shisa4Q8CA71 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Birc2-201ENSMUST00000054878 378 ntBASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa4Q8CA71 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa4Q8CA71 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa4Q8CA71 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Gm25406-201ENSMUST00000157599 105 ntBASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa4Q8CA71 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Gm7506-201ENSMUST00000207758 815 ntBASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa4Q8CA71 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.8■□□□□ 0.6
Shisa4Q8CA71 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms