Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Slc46a2Q8CA03 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Slc46a2Q8CA03 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 App-207ENSMUST00000227737 2827 ntBASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Gm10252-201ENSMUST00000209541 832 ntBASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.63■□□□□ 0.09
Slc46a2Q8CA03 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Gm13186-201ENSMUST00000118031 316 ntBASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc46a2Q8CA03 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc46a2Q8CA03 Gm7791-201ENSMUST00000219066 539 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms